Nauman Ahmed

PhD student at the Computer Engineering Group of the Faculty of Engineering, Mathematics and Computer Science (EEMCS/EWI), Delft University of Technology.

Research

Acceleration of genome analysis on accelerator based architectures

Publications

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    2016

  1. N. Ahmed, K.L.M. Bertels, Z. Al-Ars, A Comparison of Seed-and-Extend Techniques in Modern DNA Read Alignment Algorithms1597_a_comparison_of_seedandextend_techniques_in_modern_dna_re.pdf (December 2016), Workshop on Accelerator-Enabled Algorithms and Applications in Bioinformatics (WACEBI 2016), 15 December 2016, Shenzhen, China [Conference Paper]
  2. Z. Al-Ars, N. Ahmed, K.L.M. Bertels, Early DNA Analysis Using Incomplete DNA Datasets (November 2016), filed in Europe [Patent]
  3. 2015

  4. N. Ahmed, V.M. Sima, E.J. Houtgast, K.L.M. Bertels, Z. Al-Ars, Heterogeneous Hardware/Software Acceleration of the BWA-MEM DNA Alignment Algorithm1500_heterogeneous_hardwaresoftware_acceleration_of_the_bwamem.pdf (November 2015), International Conference On Computer Aided Design (ICCAD 2015), 2-6 November 2015, Austin, USA [Conference Paper]
Nauman Ahmed